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Aplicacións

velvet

Versións dispoñibles:

SVG

  • 1.2.10

FinisTerraeII

  • 1.2.10

Descrición


Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom.

Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired-end read and long read information, when available, to retrieve the repeated areas between contigs.

Guía de uso


FT2:

Please use the following module commands:

module spider velvet

Check the velvet available versions

module load compiler/version velvet/version

Load specific version environment

module help velvet

Get a brief server specific user guide

 

SVG:

Please use the following module commands:

module av velvet

Check the velvet available versions

module help velvet

Get a brief server specific user guide

module load velvet

Load default version environment

module load velvet/<version>

Load specific version environment

 

URL Manual

Soporte


Ante calquera dúbida ou problema co uso deste paquete de software diríxase a aplicacions@cesga.es